DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab7a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_957222.1 Gene:rab7a / 393902 ZFINID:ZDB-GENE-040426-1352 Length:207 Species:Danio rerio


Alignment Length:200 Identity:61/200 - (30%)
Similarity:110/200 - (55%) Gaps:22/200 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.::.:.:|:.:|..|:|.|...:.|.:..|::.:|:|||:|.:||.|
Zfish     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSDDPNHRQVSM 132
            |..:.||.|...:||:|:|:..:|:.:|.|..|.....    |:....:::|||.|..| |||:.
Zfish    73 LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVTT 136

  Fly   133 EQGFNYAH-RGALGFEEVSAKSGMNVYDIFSSLA---------MDIYHRYVLHNPISPMPSEQEE 187
            ::...:.. :..:.:.|.|||..:||...|.::|         :::|:.:       |.|.:.:.
Zfish   137 KRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEF-------PEPIKLDR 194

  Fly   188 EDAAE 192
            .|.|:
Zfish   195 NDRAK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 54/161 (34%)
rab7aNP_957222.1 Rab7 9..179 CDD:206655 55/170 (32%)

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