DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and Rab19

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_523970.1 Gene:Rab19 / 38930 FlyBaseID:FBgn0015793 Length:219 Species:Drosophila melanogaster


Alignment Length:176 Identity:68/176 - (38%)
Similarity:108/176 - (61%) Gaps:2/176 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67
            |||:|||::::||.|.||:|::.||....:.|::..|:|:|...:::.:..:.:.||:|||:|.:
  Fly    17 HFDFLFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQE 81

  Fly    68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSM 132
            ||.::..|.||||:|:|:|||||...||.|:..|::|:||.....|.::|||||.|....|:|..
  Fly    82 RFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASNVLIILVGNKCDLEEQREVDF 146

  Fly   133 EQGFNYAH--RGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHN 176
            |:......  ...|...|.|||..|||.|.|..||.::..::..:|
  Fly   147 EEARQMCQYIPEILFVMETSAKENMNVEDAFRCLANELKRQHDANN 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/158 (39%)
Rab19NP_523970.1 Rab19 19..184 CDD:133267 65/164 (40%)

Return to query results.
Submit another query.