DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab13

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_958486.1 Gene:rab13 / 373105 ZFINID:ZDB-GENE-030826-30 Length:200 Species:Danio rerio


Alignment Length:183 Identity:84/183 - (45%)
Similarity:122/183 - (66%) Gaps:4/183 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|:|||:|::|||||||:||::||::|.|...|:.|:|||.|.:::|:..:.:.||||||:|.:|
Zfish     5 YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..:.||.|.||:||||||..||::||..|||.|:......|:.:|:|||.|....|:||.|
Zfish    70 FKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLLGNKCDIEAKRKVSKE 134

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQE 186
            .|...|....:.|.|.||||.:||.:.|:|||.||    :|.:...|.||.:|
Zfish   135 TGEKLAKEHGIRFFETSAKSSINVEESFTSLARDI----LLKSNKKPGPSGRE 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 73/156 (47%)
rab13NP_958486.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 79/169 (47%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 6/13 (46%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 6/16 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..195 4/11 (36%)

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