DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab1ab

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001007162.1 Gene:rab1ab / 368883 ZFINID:ZDB-GENE-030616-564 Length:201 Species:Danio rerio


Alignment Length:168 Identity:78/168 - (46%)
Similarity:112/168 - (66%) Gaps:0/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||||:|::|||||||||||:||:||.:||.|:.|:|:|.|.|::||..:.:.||:|||:|.:|
Zfish     5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..|.||.||||::|||:|..:||.|:..|::||.|...:.|..||||||.|....:.|...
Zfish    70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYT 134

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHR 171
            ....:|....:.|.|.|||:..||...|.::|.:|..|
Zfish   135 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 72/156 (46%)
rab1abNP_001007162.1 Rab1_Ypt1 7..172 CDD:206661 76/164 (46%)

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