DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab33b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001102414.1 Gene:Rab33b / 365793 RGDID:1308353 Length:229 Species:Rattus norvegicus


Alignment Length:183 Identity:60/183 - (32%)
Similarity:108/183 - (59%) Gaps:5/183 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF-N 70
            :||::|:|||.|||:||..||...||.::...|:|:|.:.|:|::....:.:|:|||:|.:|| .
  Rat    33 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRK 97

  Fly    71 SLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRR-MCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            |::...||:.|.::.|||:|:..||.::..|::|.:: :..:.:..:|||||.|..:..||..:.
  Rat    98 SMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDL 162

  Fly   135 GFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNP--ISPMPSEQ 185
            ...:|...::...|.|||: .|..|...::.|.:.|:...|.|  :|.:|..:
  Rat   163 AQKFADTHSMPLFETSAKN-PNDNDHVEAIFMTLAHKLKSHKPLMLSQLPDNR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 54/158 (34%)
Rab33bNP_001102414.1 Rab33B_Rab33A 32..201 CDD:133315 56/168 (33%)

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