DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rabl2

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_006242287.1 Gene:Rabl2 / 362987 RGDID:1306749 Length:250 Species:Rattus norvegicus


Alignment Length:197 Identity:60/197 - (30%)
Similarity:103/197 - (52%) Gaps:19/197 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLM 73
            |::.||||.||||.|:.||..|.|..:.|.|..:.:...:..:..:.:::..|||:|.:||.|:.
  Rat    50 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMH 114

  Fly    74 PSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ-GFN 137
            .|.|..||..::|:|:....:::|:..|..|:|...|: :..:||.||.|    ..:.|.| .|:
  Rat   115 ASYYHKAHACIMVFDVQRKITYKNLGTWYAELREFRPE-IPCILVANKID----ADIQMTQKNFS 174

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFS-SLAMDIYHR--------YVLHNPISPMPSEQEEEDAAES 193
            :|.:.:|....|||..|.||..:|: ::.:.:.::        .||.. :.....||:|||   :
  Rat   175 FAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVAYKKSSQDFMDEVLQE-LENFKLEQKEED---T 235

  Fly   194 PD 195
            ||
  Rat   236 PD 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 51/157 (32%)
Rabl2XP_006242287.1 RabL2 49..209 CDD:133324 51/163 (31%)

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