DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab3

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:166 Identity:66/166 - (39%)
Similarity:107/166 - (64%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67
            :|||:||:|::|:|.|||:..|.|::||.||..::.|:|||.|.::|....:.:.||:|||:|.:
  Fly    17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTAGQE 81

  Fly    68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSM 132
            |:.::..:.||.|.|.:|:||:|:..||.::..|:.:|:....|...|:|||||.|..:.|.:|.
  Fly    82 RYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRVISF 146

  Fly   133 EQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            |:|...|.:..:.|.|.|||..:||..:|..| :||
  Fly   147 ERGRQLADQLGVEFFETSAKENVNVKAVFERL-VDI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/156 (38%)
Rab3NP_523687.1 Rab3 21..185 CDD:206657 63/162 (39%)

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