DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab32

DIOPT Version :9

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_525109.1 Gene:Rab32 / 35940 FlyBaseID:FBgn0002567 Length:686 Species:Drosophila melanogaster


Alignment Length:171 Identity:45/171 - (26%)
Similarity:91/171 - (53%) Gaps:7/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVEL-VSRVMMLQVWDTSGDKR 68
            ::|:|:||:|:.|.||:..:.|:....|::.|..|:|:|...:.::. .:.::.||:||.:|.:|
  Fly   481 EHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVRLQLWDIAGQER 545

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEI--RRMCPD--KVTVLLVGNKSDDPNHRQ 129
            |.::....|:.|.|..:|:|:|.|.:|..:..|.:::  :...||  .:..:|:.||.|......
  Fly   546 FGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGI 610

  Fly   130 VSMEQGFN--YAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            ::..:..:  ....|..|:.|.|||..:|:.:...:|...|
  Fly   611 ITQPEKMDEYVRENGFAGWFETSAKENINIDEAARALVNKI 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 RAB 8..171 CDD:197555 44/168 (26%)
Rab 8..165 CDD:206640 42/163 (26%)
Rab32NP_525109.1 Rab32_Rab38 484..686 CDD:206692 44/168 (26%)
RAB 484..652 CDD:197555 44/168 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454377
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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