DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab2

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_477090.1 Gene:Rab2 / 35577 FlyBaseID:FBgn0014009 Length:213 Species:Drosophila melanogaster


Alignment Length:208 Identity:74/208 - (35%)
Similarity:119/208 - (57%) Gaps:18/208 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :.||||.:::||:||||||||::|:|.||...:..|:|::..||.:.:..:.:.||:|||:|.:.
  Fly     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.|:..|.||.|.|.|||||||..::|.::..|:::.|:.....:.::|:|||||..:.|:|..|
  Fly    68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVKKE 132

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRY-----------------VLHNPISP- 180
            :|..:|....|.|.|.||::..||.:.|.:.|.:||.:.                 ..|:|.:| 
  Fly   133 EGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGQQHSPTNPS 197

  Fly   181 MPSEQEEEDAAES 193
            :|.......||.|
  Fly   198 LPGAGGAAGAANS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/156 (40%)
Rab2NP_477090.1 PLN03108 1..213 CDD:178655 74/208 (36%)

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