DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and Rab14

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:199 Identity:67/199 - (33%)
Similarity:108/199 - (54%) Gaps:13/199 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDK 67
            :::|:||.:::||.||||||||.:|::.:|......|:|::...|.:|:..:.:.||:|||:|.:
  Fly    31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQE 95

  Fly    68 RFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSM 132
            ||.::..|.||.|.|.|:|||||...::.::..|:.:.|.:......:.|:|||||..:.|:|:.
  Fly    96 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTY 160

  Fly   133 EQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRY-------------VLHNPISPMPSE 184
            |:...:|....|.|.|.||.:|.||.:.|...|..||...             |.|.|..|..:.
  Fly   161 EEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTS 225

  Fly   185 QEEE 188
            ...|
  Fly   226 LSSE 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 58/156 (37%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 62/164 (38%)

Return to query results.
Submit another query.