DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab30

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster


Alignment Length:168 Identity:63/168 - (37%)
Similarity:105/168 - (62%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSG 65
            |..:.:|||::::|::||||:||:.||:...|......|:|:|...::||:....:.||:|||:|
  Fly     1 MEDYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAG 65

  Fly    66 DKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQV 130
            .:||.|:..|.|||||.::|||||:...:|..:..|::||:.....||..:|||||: |.:.|::
  Fly    66 QERFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKT-DRDDREI 129

  Fly   131 SMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            ..:.|..:|.:..:.|.|.|||...||..:|..:|.::
  Fly   130 PTQIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAEL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/156 (38%)
Rab30NP_609094.1 Rab30 1..168 CDD:133314 63/168 (38%)

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