DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab5aa

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_958893.1 Gene:rab5aa / 337737 ZFINID:ZDB-GENE-030131-139 Length:216 Species:Danio rerio


Alignment Length:158 Identity:61/158 - (38%)
Similarity:96/158 - (60%) Gaps:0/158 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            ||:::||:|.||||.|::||...:|.|....|:|.....:::.|....:..::|||:|.:|::||
Zfish    22 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTLCLDDTTVKFEIWDTAGQERYHSL 86

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            .|..||.|...::|||||:.:||.....|:||::|.....:.:.|.|||:|..|.|.|..:...:
Zfish    87 APMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQDAQS 151

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLA 165
            ||...:|.|.|.|||:.|||.:||.::|
Zfish   152 YADDNSLLFMETSAKTSMNVNEIFMAIA 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/156 (38%)
rab5aaNP_958893.1 Rab5_related 21..183 CDD:206653 61/158 (39%)

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