DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab5

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster


Alignment Length:158 Identity:62/158 - (39%)
Similarity:95/158 - (60%) Gaps:0/158 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            ||:::||:|.||||.|::||...:|.|....|:|.....:::.:...|:..::|||:|.:|::||
  Fly    30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSL 94

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            .|..||.|...::||||.:..|||....|:||:.:.....:.:.|.|||:|..|.|.|..::...
  Fly    95 APMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLA 165
            ||....|.|.|.|||:||||.|||.::|
  Fly   160 YAEENGLLFMETSAKTGMNVNDIFLAIA 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/156 (39%)
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 62/158 (39%)

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