DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab7a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_076440.1 Gene:Rab7a / 29448 RGDID:61908 Length:207 Species:Rattus norvegicus


Alignment Length:202 Identity:62/202 - (30%)
Similarity:114/202 - (56%) Gaps:24/202 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.::.:.:|:.:|..|:|.|...:.|.:..|::.:|:|||:|.:||.|
  Rat     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQS 72

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSDDPNHRQVSM 132
            |..:.||.|...:||:|:|:..:|:.:|.|..|.....    |:....:::|||.|..| |||:.
  Rat    73 LGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLEN-RQVAT 136

  Fly   133 E--QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLA---------MDIYHRYVLHNPISPMPSEQE 186
            :  |.:.|: :..:.:.|.|||..:||...|.::|         :::|:.:       |.|.:.:
  Rat   137 KRAQAWCYS-KNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEF-------PEPIKLD 193

  Fly   187 EEDAAES 193
            :.:.|::
  Rat   194 KNERAKA 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 56/162 (35%)
Rab7aNP_076440.1 Rab7 9..179 CDD:206655 57/171 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P51149 28..41 2/12 (17%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P51149 67..82 6/14 (43%)

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