DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab5b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001073405.1 Gene:Rab5b / 288779 RGDID:1306489 Length:215 Species:Rattus norvegicus


Alignment Length:158 Identity:63/158 - (39%)
Similarity:96/158 - (60%) Gaps:0/158 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            ||:::||:|.||||.|::||...:|.|....|:|.....:||.|....:..::|||:|.:|::||
  Rat    21 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            .|..||.|...::|||||:.::|.....|:||::|.....:.:.|.|||:|..|.|.|..|:...
  Rat    86 APMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPSIVIALAGNKADLANKRMVEYEEAQA 150

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLA 165
            ||...:|.|.|.|||:.|||.|:|.::|
  Rat   151 YADDNSLLFMETSAKTAMNVNDLFLAIA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/156 (40%)
Rab5bNP_001073405.1 Rab5_related 20..182 CDD:206653 63/158 (40%)

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