DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab5a

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_080163.1 Gene:Rab5a / 271457 MGIID:105926 Length:215 Species:Mus musculus


Alignment Length:186 Identity:65/186 - (34%)
Similarity:103/186 - (55%) Gaps:13/186 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            ||:::||:|.||||.|::||...:|.|....|:|.....::|.|....:..::|||:|.:|::||
Mouse    21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSL 85

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            .|..||.|...::|||||:.:||.....|:||::|.....:.:.|.|||:|..|.|.|..::..:
Mouse    86 APMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQS 150

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAES 193
            ||...:|.|.|.|||:.|||.:||.::|             ..:|..:.:...|.|
Mouse   151 YADDNSLLFMETSAKTSMNVNEIFMAIA-------------KKLPKNEPQNPGANS 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/156 (39%)
Rab5aNP_080163.1 Rab5_related 20..182 CDD:206653 62/173 (36%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 44..56 4/11 (36%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 77..93 7/15 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 181..215 3/13 (23%)

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