DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab8b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_775589.1 Gene:Rab8b / 235442 MGIID:2442982 Length:207 Species:Mus musculus


Alignment Length:165 Identity:80/165 - (48%)
Similarity:111/165 - (67%) Gaps:0/165 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||||:|::|||||||:|||.|||:|.|...::.|:|||.|.|::||..:.:.||:|||:|.:|
Mouse     5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..:.||.|.||:||||||:.|||.||..|::.|.......|..:::|||.|..:.||||.|
Mouse    70 FRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKE 134

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            :|...|....:.|.|.||||..||.:.|.:||.||
Mouse   135 RGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 73/156 (47%)
Rab8bNP_775589.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 80/164 (49%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 5/13 (38%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 6/16 (38%)

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