DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB18

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001243339.1 Gene:RAB18 / 22931 HGNCID:14244 Length:235 Species:Homo sapiens


Alignment Length:190 Identity:64/190 - (33%)
Similarity:98/190 - (51%) Gaps:31/190 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVW------------ 61
            |:|::|:||||||.||:||:||.|..:...|:|:|.|.:::.:......|.:|            
Human    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQTANFFL 74

  Fly    62 -----------------DTSGDKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC 109
                             ||:|.:||.:|.||.||.|.|::||||:|...:|..:|.|:.|:...|
Human    75 KSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYC 139

  Fly   110 P-DKVTVLLVGNKSDDPNHRQVSMEQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI 168
            . :.:..:|||||.|..| |:|...:|..:|.:.::.|.|.|||:...|...|..|...|
Human   140 TRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKI 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 62/185 (34%)
RAB18NP_001243339.1 Rab18 9..198 CDD:206656 63/188 (34%)

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