DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rabl6

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001019787.2 Gene:Rabl6 / 227624 MGIID:2442633 Length:725 Species:Mus musculus


Alignment Length:149 Identity:37/149 - (24%)
Similarity:69/149 - (46%) Gaps:28/149 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKA--RSVELVSRVMMLQVWDT----S 64
            |..|:::.||...||:.|..|....:|.|:|:.|..|.|.:  .:.:....|:.::|||.    .
Mouse    42 YNMKIVIRGDRNTGKTALWHRLQGKKFVEEYIPTQEIQVTSIHWNYKTTDDVVKVEVWDVVDKGK 106

  Fly    65 GDKRFNSLMPSN------------------YRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPD 111
            ..||.:.|...|                  |::.:|:::::|||...:|..:   ::|:.:: |.
Mouse   107 CKKRGDGLKTENDPQEAESELALDAEFLDVYKNCNGVVMMFDITKQWTFNYV---LRELPKV-PT 167

  Fly   112 KVTVLLVGNKSDDPNHRQV 130
            .|.|.::||..|...||.:
Mouse   168 HVPVCVLGNYRDMGEHRVI 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 36/147 (24%)
Rabl6NP_001019787.2 Small GTPase-like 39..279 37/149 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases 44..221 CDD:476819 36/147 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..364
PHA03307 283..>611 CDD:223039
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..725
Interaction with CDKN2A. /evidence=ECO:0000250 652..690
Blue background indicates that the domain is not in the aligned region.

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