DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and Rab21

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_077774.1 Gene:Rab21 / 216344 MGIID:894308 Length:222 Species:Mus musculus


Alignment Length:168 Identity:55/168 - (32%)
Similarity:102/168 - (60%) Gaps:4/168 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFN 70
            |.|||::||:..|||:.|::|:.:::|.:|::.|:......:.:.:..:.:.|.:|||:|.:||:
Mouse    16 YSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFH 80

  Fly    71 SLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQG 135
            :|.|..||.::|.:||||:|...|||.:..|:||:|:|..:::.:.:||||.|....|.||:::.
Mouse    81 ALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEA 145

  Fly   136 FNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYV 173
            .:||..........|||....:.::|    :|:..|.:
Mouse   146 ESYAESVGAKHYHTSAKQNKGIEELF----LDLCKRMI 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 52/156 (33%)
Rab21NP_077774.1 Rab21 18..179 CDD:133323 54/164 (33%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9UL25 41..54 3/12 (25%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9UL25 74..92 7/17 (41%)

Return to query results.
Submit another query.