DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB12

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001020471.3 Gene:RAB12 / 201475 HGNCID:31332 Length:340 Species:Homo sapiens


Alignment Length:196 Identity:78/196 - (39%)
Similarity:118/196 - (60%) Gaps:6/196 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            |:..:|:::|..||||:.|:.||:||.|.|....|:|:|.|.::|||..:.:.||:|||:|.:||
Human   136 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 200

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            ||:..:.||||.||:||||||..::|.::..|||.|.:...:...:||||||.|....|:::.:|
Human   201 NSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQ 265

  Fly   135 GFNYAHR-GALGFEEVSAKSGMNVYDIFSSLAMDIYHRY---VLHNPISP--MPSEQEEEDAAES 193
            |..:|.: ..:.|.|.|||...||.:||..|..||..:.   :|.|.:|.  :..:.|.|...|.
Human   266 GEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEPEIPPEL 330

  Fly   194 P 194
            |
Human   331 P 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 67/157 (43%)
RAB12NP_001020471.3 Rab12 139..340 CDD:206699 77/193 (40%)

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