DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and Rab5b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_803130.1 Gene:Rab5b / 19344 MGIID:105938 Length:215 Species:Mus musculus


Alignment Length:131 Identity:26/131 - (19%)
Similarity:54/131 - (41%) Gaps:24/131 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 FWNAETIGYFWKSWNI-PVHRFAVRHIYSPMMRNNFSKMSAFFVVFFVSAFFHEYLVSVPLKIFR 249
            ||:.:..|..|.:.|. .|...|...|.|....::|:.:.|.:.:..|    :|         .|
Mouse   432 FWDHDLDGGAWSTRNCSTVRSTADETICSCSHLSSFAVLMALYDIGDV----YE---------LR 483

  Fly   250 LWSYYGM---MGQIPLSIITDKVVRGGRTGNIIVWLSLIVGQPLAILMYGHDWYILNFGVSAVQN 311
            |.|:.|:   :..:.:.|||...||..::....:.:.|.:...:|       :::...|::..:|
Mouse   484 LISWVGLSLSLVCLLICIITFYAVRSIQSTRNTIHMHLCISLFIA-------YFVFLVGITRTEN 541

  Fly   312 Q 312
            :
Mouse   542 K 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640
Rab5bNP_803130.1 Rab5_related 20..182 CDD:206653
Switch 1. /evidence=ECO:0000250|UniProtKB:P20339 44..56
Switch 2. /evidence=ECO:0000250|UniProtKB:P20339 77..93
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..215
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.