DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab12

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_077768.3 Gene:Rab12 / 19328 MGIID:894284 Length:291 Species:Mus musculus


Alignment Length:196 Identity:80/196 - (40%)
Similarity:118/196 - (60%) Gaps:6/196 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            |:..:|:::|..||||:.|:.||:||.|.|....|:|:|.|.::|||..:.:.||:|||:|.:||
Mouse    87 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERF 151

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQ 134
            ||:..:.||||.||:||||||..::|.::..|||.|.:...:...:||||||.|....|::|.:|
Mouse   152 NSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREISRQQ 216

  Fly   135 GFNYAHR-GALGFEEVSAKSGMNVYDIFSSLAMDIYHRY---VLHNPISP--MPSEQEEEDAAES 193
            |..:|.: ..:.|.|.|||...||.:||..|..||..:.   ||.|.:|.  :..:.|.|...|.
Mouse   217 GEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDVLRNELSNSILSLQPEPEIPPEL 281

  Fly   194 P 194
            |
Mouse   282 P 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 68/157 (43%)
Rab12NP_077768.3 Rab12 90..291 CDD:206699 79/193 (41%)

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