DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab11b

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_030105459.1 Gene:Rab11b / 19326 MGIID:99425 Length:278 Species:Mus musculus


Alignment Length:188 Identity:65/188 - (34%)
Similarity:109/188 - (57%) Gaps:13/188 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSLMP 74
            |:::||||||||.||.||:.:.|..:...|:|::...||:::..:.:..|:|||:|.:|:.::..
Mouse    74 VVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITS 138

  Fly    75 SNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFNYA 139
            :.||.|.|.||||||....:::|::.|:||:|......:.::|||||||..:.|.|..::...:|
Mouse   139 AYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFA 203

  Fly   140 HRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAA---ESP 194
            .:..|.|.|.||....||.:.|.::..:||.          :.|:::..|.|   |||
Mouse   204 EKNNLSFIETSALDSTNVEEAFKNILTEIYR----------IVSQKQIADRAAHDESP 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 57/154 (37%)
Rab11bXP_030105459.1 Rab11_like 74..233 CDD:206660 57/158 (36%)

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