DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rabr-1

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_508455.2 Gene:rabr-1 / 180554 WormBaseID:WBGene00019317 Length:218 Species:Caenorhabditis elegans


Alignment Length:189 Identity:68/189 - (35%)
Similarity:120/189 - (63%) Gaps:1/189 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :::|||::|:||...||||:|:||:::.|...::.|:|:|.|.::::|....:.|::|||:|.:|
 Worm     3 YNHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTAGMER 67

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDG-WMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSM 132
            :.::..|.|.||||::.|||:|:.|||:|::. |:|||::..|....::|||||:|....|:|..
 Worm    68 YRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKADMDQERKVDF 132

  Fly   133 EQGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAA 191
            ::....|.|..:...|||||:|:|..:.|.:|...:..|....:..|....:.||..:|
 Worm   133 DRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRERITAGSMHSDESDDNEEFSSA 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 61/157 (39%)
rabr-1NP_508455.2 Rab 7..165 CDD:206640 61/157 (39%)

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