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Protein Alignment RabX2 and rab-30
DIOPT Version :9
Sequence 1: | NP_572627.1 |
Gene: | RabX2 / 31971 |
FlyBaseID: | FBgn0030200 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_499328.1 |
Gene: | rab-30 / 176476 |
WormBaseID: | WBGene00004282 |
Length: | 216 |
Species: | Caenorhabditis elegans |
Alignment Length: | 173 |
Identity: | 64/173 - (36%) |
Similarity: | 98/173 - (56%) |
Gaps: | 15/173 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSHFDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSG 65
|..:.|||||:::|::||||:||:.:|:...|......|:|:|...::|::.:..:.||:|||:|
Worm 1 MEDYKYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAG 65
Fly 66 DKRFNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQV 130
.:||.|:..|.|||||.|:||||::...||..:..|:.||......:|..:|||||.|..:.|:|
Worm 66 QERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKILVGNKVDKGDEREV 130
Fly 131 SMEQG--------FNYAHRGALGFEEVSAKSGMNVYDIFSSLA 165
....| |:| |.|.||....||..:|..:|
Worm 131 PERIGRDFSDVNQFDY-------FLETSALDATNVDQLFEQVA 166
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1149105at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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