DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab-6.1

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_498993.1 Gene:rab-6.1 / 176275 WormBaseID:WBGene00004269 Length:205 Species:Caenorhabditis elegans


Alignment Length:197 Identity:71/197 - (36%)
Similarity:107/197 - (54%) Gaps:14/197 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNSL 72
            ||::.||:..|||:.::.||..|.|...|..|:|||..::::.|..|.:.||:|||:|.:||.||
 Worm    12 FKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSL 76

  Fly    73 MPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSMEQGFN 137
            :||..|.:...::|||||::.||.....|:.::|......|.::|||||:|..:.||||.|.|..
 Worm    77 IPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEK 141

  Fly   138 YAHRGALGFEEVSAKSGMNVYDIFSSLAMDI----------YHRYVLHNPISPMPSEQEEEDAAE 192
            .|....:.|.|.|||:|.||..:|..:|..:          ....|:.||    |.:.||....:
 Worm   142 KARDLNVMFIETSAKAGYNVKQLFRKIATALPGIVQEETPEQPNIVIMNP----PKDAEESQGRQ 202

  Fly   193 SP 194
            .|
 Worm   203 CP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 63/156 (40%)
rab-6.1NP_498993.1 Rab6 12..172 CDD:206654 64/159 (40%)

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