DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and rab-7

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_496549.1 Gene:rab-7 / 174834 WormBaseID:WBGene00004271 Length:209 Species:Caenorhabditis elegans


Alignment Length:194 Identity:70/194 - (36%)
Similarity:107/194 - (55%) Gaps:16/194 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRFNS 71
            |.||::||||||||:.|:.::.:.||:.:|..|:|.|...|.|.:..|.:.||:|||:|.:||.|
 Worm     9 LLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQERFQS 73

  Fly    72 LMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMC----PDKVTVLLVGNKSDDPNHRQVSM 132
            |..:.||.|...:|.:|:|::.||:::|.|..|.....    ||....:|:|||.|..:.|.||.
 Worm    74 LGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLLGNKVDLESQRAVSS 138

  Fly   133 EQGFNYAH-RGALGFEEVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEEDAAESPD 195
            ::..::.. :|.:.:.|||||..:||...|.::|.|...|           ..||..|..|.||
 Worm   139 KRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALAR-----------ESQETNDFPEFPD 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 60/161 (37%)
rab-7NP_496549.1 Rab7 10..181 CDD:206655 63/181 (35%)

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