DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and Rab8

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_321946.4 Gene:Rab8 / 1281958 VectorBaseID:AGAMI1_007866 Length:208 Species:Anopheles gambiae


Alignment Length:178 Identity:79/178 - (44%)
Similarity:114/178 - (64%) Gaps:4/178 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||||:|::|||||||:|:|.|||:|.|...::.|:|||.|.|:::|..:.:.||:|||:|.:|
Mosquito     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..:.||.|.||:||||||..|||:||..|::.|.......|..:|:|||.:....|||:..
Mosquito    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNKCELNEKRQVTRV 134

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDI----YHRYVLHNP 177
            :|...|....:.|.|.|||:.:||.|.|.:||.||    ..|...:||
Mosquito   135 RGEQLAVEYGIKFMETSAKASINVDDAFFTLARDIKCKMEKRMEANNP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 69/156 (44%)
Rab8XP_321946.4 Rab8_Rab10_Rab13_like 6..172 CDD:206659 76/165 (46%)

Return to query results.
Submit another query.