DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab40

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_316810.5 Gene:Rab40 / 1277354 VectorBaseID:AGAMI1_013162 Length:262 Species:Anopheles gambiae


Alignment Length:168 Identity:63/168 - (37%)
Similarity:90/168 - (53%) Gaps:1/168 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|||.|||::|||.|||..:|....|......:....|...|..::.|..:.:.||:|||||..|
Mosquito     5 YDYLLKVLLVGDSDVGKQEILSGLDDGSTESPFCSGSGTAHKTTTILLDGKRVKLQIWDTSGQGR 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.:::.|..|.|.||:||||||:..||..::.|:||:....|. |..:||||:......|||:.:
Mosquito    70 FCTIIRSYSRGAQGIILVYDITNKWSFDGLNRWLKEVEEHAPG-VPKVLVGNRLHLAFKRQVAAK 133

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIYHR 171
            |...||.|..:...|:|.....|:.:.|..||....||
Mosquito   134 QAELYASRNKMACFEISPLCDFNIRESFCELARMALHR 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 56/156 (36%)
Rab40XP_316810.5 P-loop containing Nucleoside Triphosphate Hydrolases 3..196 CDD:476819 63/168 (38%)
SOCS 181..223 CDD:470605
Blue background indicates that the domain is not in the aligned region.

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