DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and RAB35

DIOPT Version :10

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_006852.1 Gene:RAB35 / 11021 HGNCID:9774 Length:201 Species:Homo sapiens


Alignment Length:187 Identity:76/187 - (40%)
Similarity:123/187 - (65%) Gaps:10/187 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|:|||:|::||||||||.||:||:|:.|:..|:.|:|:|.|.|:||:....:.||:|||:|.:|
Human     5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            |.::..:.||..||:::|||:||::||.|:..|:.||.:.| |.|..:|||||:|||..:.|..|
Human    70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKNDDPERKVVETE 133

  Fly   134 QGFNYAHRGALGFE--EVSAKSGMNVYDIFSSLAMDIYHRYVLHNPISPMPSEQEEE 188
            ..:.:|  |.:|.:  |.|||..:||.::|:.:.     ..||......:..:|:::
Human   134 DAYKFA--GQMGIQLFETSAKENVNVEEMFNCIT-----ELVLRAKKDNLAKQQQQQ 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 Rab 8..165 CDD:206640 71/158 (45%)
RAB35NP_006852.1 Rab35 3..201 CDD:133310 76/187 (41%)
Switch 1. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 30..42 4/11 (36%)
Switch 2. /evidence=ECO:0000269|PubMed:30905672, ECO:0007744|PDB:6IF2, ECO:0007744|PDB:6IF3 64..80 5/15 (33%)

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