DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabX2 and Rab15

DIOPT Version :9

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_598811.3 Gene:Rab15 / 104886 MGIID:1916865 Length:212 Species:Mus musculus


Alignment Length:199 Identity:73/199 - (36%)
Similarity:120/199 - (60%) Gaps:8/199 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FDYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKR 68
            :|.||::|::|||||||:|||.||:|:.|...::.|:|:|.|.:::|:....:.:|:|||:|.:|
Mouse     5 YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQER 69

  Fly    69 FNSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRRMCPDKVTVLLVGNKSDDPNHRQVSME 133
            :.::....||.|.||.|||||:|.:|:|:|..|:.::....|:.|..:|:|||:|:...|||..|
Mouse    70 YQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGRE 134

  Fly   134 QGFNYAHRGALGFEEVSAKSGMNVYDIFSSLAMDIY--HRYVLHNPISPMPSE------QEEEDA 190
            ||...|....:.|.|.||.:.:|:.:.|:.|...:.  ||..|....:...:|      :|:|..
Mouse   135 QGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELDGLRTRASNELALAELEEDEGK 199

  Fly   191 AESP 194
            .|.|
Mouse   200 PEGP 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 RAB 8..171 CDD:197555 63/164 (38%)
Rab 8..165 CDD:206640 62/156 (40%)
Rab15NP_598811.3 Rab15 9..172 CDD:206698 63/162 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..212 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1149105at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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