DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RabX2 and rab19

DIOPT Version :9

Sequence 1:NP_572627.1 Gene:RabX2 / 31971 FlyBaseID:FBgn0030200 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_017210051.1 Gene:rab19 / 103909962 ZFINID:ZDB-GENE-140106-71 Length:175 Species:Danio rerio


Alignment Length:103 Identity:39/103 - (37%)
Similarity:69/103 - (66%) Gaps:0/103 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKVLVLGDSGVGKSCLLMRFSDDRFTEKYLRTMGIDVKARSVELVSRVMMLQVWDTSGDKRF 69
            |:|||::::|||.|||:|::..|.....||....|:|:|...||:::..|.:.:|||||:|.:||
Zfish    67 DFLFKIILIGDSNVGKTCVIQSFRSAEVTELQHNTIGVDFTVRSIDVDGRRVKMQVWDTAGQERF 131

  Fly    70 NSLMPSNYRSAHGILLVYDITSSKSFQNIDGWMKEIRR 107
            .::..|.||||||.::.||::...:|.::..|::.:.:
Zfish   132 RTITQSYYRSAHGAMIAYDLSRRDTFDSLPHWIQALEQ 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabX2NP_572627.1 RAB 8..171 CDD:197555 37/100 (37%)
Rab 8..165 CDD:206640 37/100 (37%)
rab19XP_017210051.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1149105at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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