Protein Alignment Psf3 and Gins3

DIOPT Version :10

• Sequence 1: NP_572624.1
• Gene: Psf3 / 31967
• FlyBaseID: FBgn0030196
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_084474.1
• Gene: Gins3 / 78833
• MGIID: 1926083
• Length: 216
• Species: Mus musculus
• Alignment Length: 208
• Identity: 64/208 - (30%)
• Similarity: 106/208 - (50%)
• Gaps: 24/208 - (11%)

  Fly     6 YFP----------NYYSIEDIFVTQEKVECRVNTKLQRMG--FLDSGAESDDLEP---GRTVNLP 55
            |||          |:.|::||.::|||:..||.|.:.|:|  ||:.||.|:...|   |..:.||
Mouse     5 YFPVESGALGPEENFLSLDDILMSQEKLPVRVETPMPRLGAFFLERGAGSEPDHPLPQGTKLELP 69

  Fly    56 LWYIKEL-KVNNAYFTVAVPDIYRNVHKAVCEAETTHIELGRLHPYFYEFGRYLTPYD--RNHVI 117
            ||..|.| .......:|.:|.:|:...:.|..|:...::|.::.|:||.||..|..:|  .|..|
Mouse    70 LWLAKGLFDHKRRILSVELPKMYQEGWRTVFSADANVVDLHKMGPHFYGFGSQLLHFDSPENADI 134

  Fly   118 GRIIFETLRQRVRHLLDISKS----DGQAAKAEHRLDNIEAKLHEAGVRTNSQYIEWLQMTGNKI 178
            .:.:.:|...|.|.::|.|::    |..|..|  |||..|..|.:.|.|:.:.:..|.:...::|
Mouse   135 SQSLLKTFIGRFRRIMDSSQNSYNEDTSALVA--RLDETERGLFQIGQRSLNDFQSWEKGQASQI 197

  Fly   179 RTSELVEEHQKKR 191
            ..|.||:.::|::
Mouse   198 TASSLVQNYKKRK 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psf3	NP_572624.1	GINS_B_Psf3	10..74	CDD:412029	25/69 (36%)
		GINS_A_psf3	68..173	CDD:212551	31/110 (28%)
Gins3	NP_084474.1	Not essential for folding and stability of GINS complex, but may regulate accessibility to the central complex pore. /evidence=ECO:0000250	1..16		3/10 (30%)
		GINS_B_Psf3	19..89	CDD:412029	25/69 (36%)
		GINS_A_psf3	83..192	CDD:212551	31/110 (28%)