Protein Alignment Psf3 and Gins3

DIOPT Version :10

• Sequence 1: NP_572624.1
• Gene: Psf3 / 31967
• FlyBaseID: FBgn0030196
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_001100878.1
• Gene: Gins3 / 307639
• RGDID: 1308153
• Length: 216
• Species: Rattus norvegicus
• Alignment Length: 208
• Identity: 65/208 - (31%)
• Similarity: 108/208 - (51%)
• Gaps: 24/208 - (11%)

  Fly     6 YFP----------NYYSIEDIFVTQEKVECRVNTKLQRMG--FLD--SGAESD-DLEPGRTVNLP 55
            |||          |:.|::||.::|||:..||.|.:.|:|  ||:  :|||:| .|..|..:.||
  Rat     5 YFPVESGALGPEENFLSLDDIVMSQEKLPVRVETPMPRLGAFFLERGAGAEADHPLPQGTKLELP 69

  Fly    56 LWYIKELKVN-NAYFTVAVPDIYRNVHKAVCEAETTHIELGRLHPYFYEFGRYLTPYD--RNHVI 117
            ||..|.|..| ....:|.:|.:|:...:.|..|:...::|.::.|:||.||..|..:|  .|..|
  Rat    70 LWLAKGLFDNKRRILSVELPKMYQEGWRTVFSADANVVDLHKMGPHFYGFGSQLLHFDSPENSDI 134

  Fly   118 GRIIFETLRQRVRHLLDISKS----DGQAAKAEHRLDNIEAKLHEAGVRTNSQYIEWLQMTGNKI 178
            .:.:.:|...|.|.::|.|::    |..|..|  |||..|..|.:.|.:..:.:..|.:...::|
  Rat   135 SQSLLQTFIGRFRRIMDSSQNSYNEDTSALVA--RLDETERGLFQIGQKGLNDFQSWEKGQASQI 197

  Fly   179 RTSELVEEHQKKR 191
            ..|.||:.::|::
  Rat   198 TASSLVQNYKKRK 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Psf3	NP_572624.1	GINS_B_Psf3	10..74	CDD:412029	27/69 (39%)
		GINS_A_psf3	68..173	CDD:212551	30/110 (27%)
Gins3	NP_001100878.1	GINS_B_Psf3	19..89	CDD:412029	27/69 (39%)
		GINS_A_psf3	83..192	CDD:212551	30/110 (27%)