DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17841 and tlcd4a

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_005162909.1 Gene:tlcd4a / 571836 ZFINID:ZDB-GENE-090402-1 Length:284 Species:Danio rerio


Alignment Length:205 Identity:49/205 - (23%)
Similarity:80/205 - (39%) Gaps:37/205 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 NGSTPTNLHEI-----CDY----DGACVQIPKDGRWDFLK--------YVVTHPVM--------- 269
            |..|.:.||.:     |.|    |.|..|.|..|....:|        |:::..::         
Zfish    72 NSRTVSTLHALLVGLFCLYILFFDEAVNQDPVWGDPTLVKINVSITTGYLISDLLLIFYYWRAIG 136

  Fly   270 ----MIHHVFIGTFGLLVVTYIRGGGHCIY--SYMFMMEFSTPFVSLRSILSTMRL-KDSRVYIA 327
                :|||:    ..|....|:.|.|...|  ::..:.|||||.|:.|.....:.. |.||..:|
Zfish   137 DKFFVIHHL----AALYAYYYVLGQGMLPYFANFRLLAEFSTPCVNQRWFFEVLGYPKSSRPNMA 197

  Fly   328 NGLLMLATFFVCRVCMWPYVMWRYSLAIEAASLWSAMWGLPRGCLISIAILFLPQLYWFYLMVLG 392
            ||:||.|.||:.|:.:.|....|........:.:...:|.....:.|...|.:..:.|.:.:..|
Zfish   198 NGVLMAAVFFLVRIAVMPVYYSRMCSVYGTEAFYRVSFGGRSAWIFSSICLDIMNVMWMHKIFRG 262

  Fly   393 ALKVFLPQKR 402
            ..||....::
Zfish   263 CYKVLQSSRK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 48/198 (24%)
tlcd4aXP_005162909.1 TRAM_LAG1_CLN8 70..261 CDD:461055 46/192 (24%)

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