DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17841 and tlcd3bb

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_001918966.2 Gene:tlcd3bb / 558881 ZFINID:ZDB-GENE-110603-2 Length:295 Species:Danio rerio


Alignment Length:324 Identity:89/324 - (27%)
Similarity:147/324 - (45%) Gaps:64/324 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LVLTSLGFIYFVSLTDFCNKYLLETTHGQRFRRKYRLMMSDVLEITNKIVSAIQASFSFFVGLIV 152
            |.:.:.|.::|..|. ..:|.:|....|.::..      .|...::.::||:|||..:...|.|:
Zfish     2 LSIIAAGSVFFPGLF-LLSKQMLRCIPGLQWNE------GDATIVSARLVSSIQAIMASTAGYII 59

  Fly   153 CKSTCTKSFVYASHFLMEAYGWFGTAYFMYDIWSMYKVHTQKIADKLHLLRITKGQGAVVSNGHA 217
             .|:| :..:...|:|..:|..|...||:|||::|:..:..|:..|.|.:               
Zfish    60 -SSSC-QDIIEDQHWLTSSYILFAVPYFVYDIYAMFLCYWHKLQVKGHEV--------------- 107

  Fly   218 NGKVNGKSASGNNNGSTPTNLHEICDYDGACVQIPKDGRWDFLKYVVTHPVMMIHHVFIGTFGLL 282
                        :|||. :....|..|          .|.:||        |::|||.:.|....
Zfish   108 ------------DNGSR-SKAMAIAGY----------LRREFL--------MVLHHVVMVTVCFP 141

  Fly   283 VVTYIR-GGGHCIYSYMFMMEFSTPFVSLRSILSTMRLKDSRVYIANGLLMLATFFVCRVCMWPY 346
            |..:.| |.|..|...||:.|.|||.|.|..||...:.:.:.::..||.:||.|||:|||.::||
Zfish   142 VSVFWRQGKGDYIQGVMFLAELSTPSVCLGKILIQYKQQHTLLHKVNGAVMLITFFLCRVLLFPY 206

  Fly   347 VMWRYSLAIEAASL--WSAMWGLPRGCLISIAILFLPQLYWFYLMVLGALKVFL---PQKRRPP 405
            :.:.|.   ..||:  :...:.:|..|.:..::|..||:|||.|:..|||::|.   ...|:||
Zfish   207 LYYIYG---RYASIPFYLVPFSVPWQCNLGASLLMAPQVYWFSLICRGALRLFTGRSSHSRKPP 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 78/272 (29%)
tlcd3bbXP_001918966.2 None

Return to query results.
Submit another query.