DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17841 and tlcd4b

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_001005924.1 Gene:tlcd4b / 449652 ZFINID:ZDB-GENE-041010-90 Length:264 Species:Danio rerio


Alignment Length:142 Identity:37/142 - (26%)
Similarity:57/142 - (40%) Gaps:35/142 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 HHVFIGTFGLLVVTYIRGGGHCIY--SYMFMMEFSTPFVSLRSILSTMRL-KDSRVYIANGLLML 333
            ||:    ..|....|:...|...|  ::..:.|.|||||:.|.....:.. :..::.:|||:.|.
Zfish   118 HHL----AALYAYGYVLTRGVLPYFANFRLISELSTPFVNQRWFFEALAYPRTHQLVVANGIAMA 178

  Fly   334 ATFFVCRVC-MWPYVMW-------------RYSLAIEAASLWSAMWGLPRGCLISIAILFLPQLY 384
            ..||:.|:. |.||  |             :..|||:.|      |      :||...|.:..:.
Zfish   179 VVFFLVRIAVMPPY--WAKVFGIIYSPTFEKLGLAIQVA------W------IISCVCLDILNII 229

  Fly   385 WFYLMVLGALKV 396
            |.|.:..|..||
Zfish   230 WMYKIARGCYKV 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 37/142 (26%)
tlcd4bNP_001005924.1 TRAM_LAG1_CLN8 45..236 CDD:461055 34/135 (25%)

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