DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17841 and tlcd4.2

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_989182.1 Gene:tlcd4.2 / 394789 XenbaseID:XB-GENE-5756243 Length:259 Species:Xenopus tropicalis


Alignment Length:160 Identity:38/160 - (23%)
Similarity:65/160 - (40%) Gaps:40/160 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 VVTHPVMMIHHVFI-GTFGLLVVTYIRGGGHCIY--SYMFMMEFSTPFVSLRSILSTM-RLKDSR 323
            |:..|.|:.||:.: .::|     |:...|...|  ::..:.|.|||||:.|.....: :.:.|.
 Frog   112 VMRDPYMVCHHLAVFYSYG-----YVLNRGVLPYFANFRLISELSTPFVNQRWFFDVIGKPRSSW 171

  Fly   324 VYIANGLLMLATFFVCRVCMWP--------------YVMWRYSLAIEAASLWSAMWGLPRGCLIS 374
            ..:.|||.|...||:.|:.:.|              |:    .|.|.....|          ::|
 Frog   172 PVLLNGLAMALVFFIVRIAVIPSYYSQVFATFGTEGYI----RLGIGPQVAW----------IVS 222

  Fly   375 IAILFLPQLYWFYLMVLGALKVFLPQKRRP 404
            ..:|.:..::|.|.:..|..||.   |.:|
 Frog   223 CVVLDILNVFWMYKIARGFYKVV---KAKP 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 35/151 (23%)
tlcd4.2NP_989182.1 TRAM_LAG1_CLN8 48..239 CDD:461055 33/145 (23%)

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