DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17841 and CLN8

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_061764.2 Gene:CLN8 / 2055 HGNCID:2079 Length:286 Species:Homo sapiens


Alignment Length:80 Identity:15/80 - (18%)
Similarity:30/80 - (37%) Gaps:21/80 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   531 LHRNREKKKLEEEQLCMGIVLVTPDIVASNHSFDLVDQSIVHDSIPHETVWKHM----------- 584
            :::.::...:||..:..|.:|:...:....    |...|..|....::|...||           
Human    58 MYKPKKVVGIEEHTVGFGELLLLLSLTLDG----LTGVSQDHMRAHYQTGSNHMMLNINLWSTVL 118

  Fly   585 ------FTAELYQFV 593
                  ||.||::|:
Human   119 LGAGILFTGELWEFL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789
CLN8NP_061764.2 TLC 64..262 CDD:214789 15/74 (20%)
ER-retrieval signal 283..286
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.