DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17841 and fld-1

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:NP_493466.2 Gene:fld-1 / 173280 WormBaseID:WBGene00013407 Length:350 Species:Caenorhabditis elegans


Alignment Length:166 Identity:34/166 - (20%)
Similarity:64/166 - (38%) Gaps:42/166 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 MMIHHVFIGTFGLLVVTYIRGGGHCIYSYMFMMEFSTPFVSLRSILSTMRL-KDSRVYIANGLLM 332
            ::.|||.:.:...:.:.:.|..|..::.  .:||.::.|:..||:|:...: |.|..:....||.
 Worm   176 LLFHHVVVLSAFAVTMFFNRFLGVVVFG--LLMELNSIFLHSRSLLNLYGVDKKSPSFRIIALLN 238

  Fly   333 LATFFVCRVCMWPYVMWRYSLAIEAASLWSAMWGLPRGCLISIAILFLPQLYWFYLMVLGALKVF 397
            :.|.|..|:|:..|                         |:...::.:|.|.|:..::.|.:...
 Worm   239 MVTLFAFRLCVSAY-------------------------LVYFVVVSIPDLEWYVSIINGLVIAS 278

  Fly   398 LPQKRRPPNAVLSAKSAAVP----------TPTPTA 423
            |..    .|.||:.:..|..          ||..||
 Worm   279 LAS----TNTVLTYRLLAADGLLGSRRTRRTPAATA 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 25/128 (20%)
fld-1NP_493466.2 TLC 102..295 CDD:214789 30/149 (20%)

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