DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17841 and tlcd3b

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_031748755.1 Gene:tlcd3b / 116407526 XenbaseID:XB-GENE-17346946 Length:280 Species:Xenopus tropicalis


Alignment Length:330 Identity:86/330 - (26%)
Similarity:136/330 - (41%) Gaps:65/330 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 GFIYFVSLTDFCNKYLLETTHGQRFRRKYRLMMSDVLEITNKIVSAIQASFSFFVGLIVCKSTCT 158
            |.::|..|      :||... |.|..|.:|...|:.:.::.::||:|||..:.:....:..:...
 Frog     8 GSLFFPGL------FLLSKA-GLRRLRIFRGDESNTIIVSARLVSSIQAVLASYTDYHIYYTHTI 65

  Fly   159 KSFVYASHFLMEAYGWFGTAYFMYDIWSMYKVHTQKIADKLHLLRITKGQGAVVSNGHANGKVNG 223
            .......|:|...|..|...||:|||::||..:..|     |.|:           ||:.|    
 Frog    66 YPCFSPRHWLAATYTRFAVPYFIYDIYAMYLCYGHK-----HRLK-----------GHSGG---- 110

  Fly   224 KSASGNNNGSTPTNLHEICDYDGACVQIPKDGRWDFLK-YVVTHPVMMIHHVFIGTFGLLV-VTY 286
                                             |...: |:....:|::||||:......| |.:
 Frog   111 ---------------------------------WHLARAYLHKEFLMVLHHVFMVAVCFPVSVLW 142

  Fly   287 IRGGGHCIYSYMFMMEFSTPFVSLRSILSTMRLKDSRVYIANGLLMLATFFVCRVCMWPYVMWRY 351
            ..|.|......|.|.|.|||||.|..||...:.:.:.::..||:|||.:||.||:.::||:.|.|
 Frog   143 REGRGDFFLGCMLMAEVSTPFVCLGKILIQYKKQHTLLHRVNGVLMLVSFFCCRLLLFPYMYWVY 207

  Fly   352 SLAIEAASLWSAMWGLPRGCLISIAILFLPQLYWFYLMVLGALKVFLPQ--KRRPPNAVLSAKSA 414
            ...: ...|:...:.|.....:..|||..||:|||||:...|..:|...  .:||.|...:..|.
 Frog   208 GQRV-GLPLYRVPFNLSPEYNLGAAILMAPQVYWFYLICRRAYTLFRQSVLSQRPKNGQPAPGST 271

  Fly   415 AVPTP 419
            :...|
 Frog   272 SAKEP 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 71/271 (26%)
tlcd3bXP_031748755.1 TLC 40..253 CDD:214789 70/266 (26%)

Return to query results.
Submit another query.