DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17841 and tlcd3a

DIOPT Version :10

Sequence 1:NP_572622.1 Gene:CG17841 / 31965 FlyBaseID:FBgn0028480 Length:429 Species:Drosophila melanogaster
Sequence 2:XP_005172081.2 Gene:tlcd3a / 100002814 ZFINID:ZDB-GENE-170623-4 Length:277 Species:Danio rerio


Alignment Length:298 Identity:78/298 - (26%)
Similarity:135/298 - (45%) Gaps:62/298 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 SDVLEITNKIVSAIQASFSFFVGLIVCKSTCTKSFVYASHFLMEAYG-WFGTAYFMYDIWSMYKV 190
            :||:.::.::||:|.|..:..||:||. |:|..:.:...|:|...:. |:|..|..|||::||..
Zfish    33 ADVVLVSERLVSSIHAVMATTVGIIVV-SSCKDNVIMDRHWLTTYFVIWYGVPYMSYDIFAMYLS 96

  Fly   191 HTQKIADKLHLLRITKGQGAVVSNGHANGKVNGKSASGNNNGSTPTNLHEICDYDGACVQIPKDG 255
            |..:.                        ||.|               |:  ||....::.....
Zfish    97 HYYRF------------------------KVKG---------------HK--DYKHHSLRTINSF 120

  Fly   256 RW-DFLKYVVTHPVMMIHHVFIGTFGLLVVTYIR-GGGHCIYSYMFMMEFSTPFVSLRSILSTMR 318
            .| :||        :::||:.:.|..|.|..:.| ..|......:|:.|.|||||||..||..:.
Zfish   121 VWKEFL--------LVLHHIALLTILLPVTLFFRKDQGDYFIGCLFLTELSTPFVSLGKILIQLG 177

  Fly   319 LKDSRVYIANGLLMLATFFVCRVCMWPYVMWRYSLAIEAASLWSAMWGLPRGCLISIAILFLPQL 383
            |:|..::..||.::|.:||:||:.::||:.|.|| :.....|:|..:.||....:....:..||:
Zfish   178 LQDCWLHKFNGGMVLLSFFMCRIALFPYMYWAYS-SHYGIPLYSVPFHLPLATNVGSVCILAPQV 241

  Fly   384 YWFYLMVLGALKVFLPQKRRPPNAVLSAKSAAVPTPTP 421
            |||.|:.....:::..|:        .|::.:.|..:|
Zfish   242 YWFVLLCRKGYRLYKRQR--------DAQNQSSPLSSP 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17841NP_572622.1 TLC 127..397 CDD:214789 74/272 (27%)
tlcd3aXP_005172081.2 TRAM_LAG1_CLN8 41..254 CDD:470668 72/263 (27%)

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