DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0289 and plxdc2a

DIOPT Version :9

Sequence 1:NP_001303555.1 Gene:l(1)G0289 / 31964 FlyBaseID:FBgn0028331 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_688332.3 Gene:plxdc2a / 559852 ZFINID:ZDB-GENE-070705-16 Length:558 Species:Danio rerio


Alignment Length:442 Identity:168/442 - (38%)
Similarity:235/442 - (53%) Gaps:39/442 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 PEEEIEAAVKNASLKESVDFHEYYNSVLYENKDEV-ASLWTELKATPE---NIMLSSSHRRAMTV 256
            ||.....:..|.|:|..:| |.||.|..|:..|.. ..||..::....   :.:||::||:.:.|
Zfish    90 PEVVTNESHDNLSIKRDMD-HIYYTSKFYKLTDSSHKDLWVNIEKMDTGKVHEILSNTHRQTLRV 153

  Fly   257 ELKFDFPFYGHFVRNITVATGGFLYTGEYVHSWLAATQYIAPLMANFDTSMSNDSFVRLHDNGTA 321
            .:.||||||||.:|.|.||||||:|||:.||..|.|||||||||||||.|:|.:|.|...|||||
Zfish   154 NMSFDFPFYGHSLRKIYVATGGFIYTGDVVHKMLTATQYIAPLMANFDLSISQNSTVIYCDNGTA 218

  Fly   322 FTAVWENVTLQDKPDFGKFTFSVTLYQSGDIVFAYMLVPTNINSIQDKEHPVKVGLSDAYII--- 383
            ....||.|.|||:...|.|||...||..|.|.|||..:|.:|:.|...:||||||||||:::   
Zfish   219 LVVQWERVHLQDEALLGSFTFQAALYADGRITFAYKEIPVDISKISSVDHPVKVGLSDAFVVLHN 283

  Fly   384 DKQLFFARRKTIYEYHRVTFQQHEITNNTIIKLAAQPTCLGYNDCNSCINHNTTFTCLWCSVLNR 448
            .:||....|:||||||||...:.:|||.|.:::...||||.::.|.:|:.....|.|.|||.|.|
Zfish   284 IEQLPNVWRRTIYEYHRVELLKSKITNATAVEMLPLPTCLQFSSCETCVTAQIGFNCSWCSRLQR 348

  Fly   449 CSTGTDRKKHEWLQMGCEATAIHTSSLCPALGDKGNNAAGQ---GKNGSANSGASANGATNTSTS 510
            ||:|.|:.:.:|:..|| .:.|.|.| |    |:..:....   ||.|.    .:|:..|.|||:
Zfish   349 CSSGFDQYRQDWVDNGC-LSEIKTQS-C----DRKQSLVSSTPPGKTGL----TAASLTTTTSTT 403

  Fly   511 SSGSST-PVTEPSVMSTRAPHATAYIKPGVDHSSDIHADGKVGNAELSKAEADNKNVGVAFGFMV 574
            |:.|.| .||...:..|..            .:|....||::|  .|.|...:....|:..|.::
Zfish   404 SASSLTGNVTGTDLFMTNL------------STSLFTDDGEMG--ILEKQSEEQMQTGLLIGILL 454

  Fly   575 PICLVFAVTLWLFYAYRNPHTKSGQLLIQFRPSQW---SWRRGEARYTAATI 623
            .:.|:....|...|.|.:|.:.:....|:.||:.|   .:|||....:.|.:
Zfish   455 TMVLMVLAVLATIYMYNHPTSSASLFFIERRPTHWPAMKFRRGSGHPSYAEV 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0289NP_001303555.1 PSI 421..477 CDD:279745 22/55 (40%)
plxdc2aXP_688332.3 NIDO <218..>257 CDD:295411 18/38 (47%)
PSI 322..365 CDD:214655 16/42 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574677
Domainoid 1 1.000 207 1.000 Domainoid score I2828
eggNOG 1 0.900 - - E1_KOG3848
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 276 1.000 Inparanoid score I2919
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1361987at2759
OrthoFinder 1 1.000 - - FOG0003589
OrthoInspector 1 1.000 - - otm26556
orthoMCL 1 0.900 - - OOG6_105338
Panther 1 1.100 - - O PTHR13055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2460
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.760

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