DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0289 and plxdc2

DIOPT Version :9

Sequence 1:NP_001303555.1 Gene:l(1)G0289 / 31964 FlyBaseID:FBgn0028331 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_002933184.1 Gene:plxdc2 / 100494642 XenbaseID:XB-GENE-856530 Length:512 Species:Xenopus tropicalis


Alignment Length:526 Identity:177/526 - (33%)
Similarity:263/526 - (50%) Gaps:81/526 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VSYNVHNVGVNGTGQRKTYDVAPAVDSNTTS----QMAPATKKPTLLGQSGNPKKVASSVVAATM 177
            |||:|:.|       :...|...:||::..|    :.:..|.:|: :||                
 Frog    34 VSYSVNTV-------KPRVDEIVSVDTHMYSHRWKRQSVDTNRPS-VGQ---------------- 74

  Fly   178 TDPSPAVIDVDVSKVVDVPEEEIEAAVKNAS-LKESVDFHEYYNSVLYENKDEVA-SLWTEL-KA 239
                            |.|:..:|...:|.: ::|..| |:||.|..|...|..: .||..: :.
 Frog    75 ----------------DFPDMFLEGTNENGTEIEEDTD-HKYYTSRTYGPLDPASRDLWVNIDQM 122

  Fly   240 TPENI----MLSSSHRRAMTVELKFDFPFYGHFVRNITVATGGFLYTGEYVHSWLAATQYIAPLM 300
            ..|.:    :||::||:|..|.|.|||||||||:|.||||||||:||||.||..|.|||||||||
 Frog   123 EKEKVKIHGILSNTHRQAARVNLSFDFPFYGHFLREITVATGGFIYTGEVVHRMLTATQYIAPLM 187

  Fly   301 ANFDTSMSNDSFVRLHDNGTAFTAVWENVTLQDKPDFGKFTFSVTLYQSGDIVFAYMLVPTNINS 365
            ||||.|:|.:|.||..|||||....|::|.|:|....|.|||..||...|.|||.|..:|..:..
 Frog   188 ANFDPSVSRNSTVRYFDNGTALVVQWDHVHLRDNYSLGSFTFQATLINDGRIVFGYKDIPVPVMQ 252

  Fly   366 IQDKEHPVKVGLSDAYII---DKQLFFARRKTIYEYHRVTFQQHEITNNTIIKLAAQPTCLGYND 427
            |....||||||||||:::   .:|:...||:||:|||||..:..:|||.:.:::...||||.:|.
 Frog   253 ISSTNHPVKVGLSDAFVVVHKIQQIPNVRRRTIFEYHRVELEMTKITNFSAVEMLPLPTCLQFNS 317

  Fly   428 CNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGCEATAIHTSSLCPALGDKGNNAAGQGKN 492
            |:||::....|.|.||::|.|||:|.||.:.:|::.||                     |.:.|:
 Frog   318 CSSCVSSMIGFNCSWCNILQRCSSGFDRHRQDWVENGC---------------------AEESKD 361

  Fly   493 GSANSGASANGATNTSTSSSGSSTPVTEPSVMSTRAPHATAYIKPGVDHSSDIHADGKVGNAELS 557
            ..........|.::.:|:...::|.:...:..:..|.|..:.:....|....:|......:.:.|
 Frog   362 TVCEDLLQTTGVSHHATTGLHATTSIYSFTTTARMASHFPSSLPTEDDTKIALHLKDNGASTDNS 426

  Fly   558 KAEADN--KNVGVAFGFMVPICLVFAVTLWLFYAYRNPHTKSGQLLIQFRPSQW---SWRRGEAR 617
            .||..|  .:.|:..|.::.|.||....|...|.|.:|.:.:...||:.|||:|   .:|||...
 Frog   427 AAEMKNGTLHTGLIIGILIVILLVITAILVAVYMYHHPTSSASLFLIERRPSRWPAMKFRRGSGH 491

  Fly   618 YTAATI 623
            ...|.:
 Frog   492 PAYAEV 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0289NP_001303555.1 PSI 421..477 CDD:279745 21/55 (38%)
plxdc2XP_002933184.1 PSI 312..355 CDD:214655 18/42 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41666
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1361987at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13055
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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