DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(1)G0289 and plxdc1

DIOPT Version :9

Sequence 1:NP_001303555.1 Gene:l(1)G0289 / 31964 FlyBaseID:FBgn0028331 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_005156181.1 Gene:plxdc1 / 100286775 ZFINID:ZDB-GENE-081104-391 Length:465 Species:Danio rerio


Alignment Length:476 Identity:160/476 - (33%)
Similarity:218/476 - (45%) Gaps:85/476 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 KKPTLLGQSGNPKKVASSVVAATMTDPSPAVID--VDVSKVVDVPEEEIEAAVKNASLKESVDFH 216
            :|..:.|||......:|...........|.:::  :.:..:.|...:.:|            |..
Zfish    24 QKDFISGQSARTDGGSSDTQRTRRDRTGPQLLNNGLSIGTLPDNTTQVVE------------DSQ 76

  Fly   217 EYYNSVLY---ENKDEVASLWTELKAT---PENI--MLSSSHRRAMTVELKFDFPFYGHFVRNIT 273
            .||:...:   ||:.:  :||.:|.:.   |..:  :|||:||:|..|.|.||||||||.||.||
Zfish    77 RYYSWCSFGPGENRTK--NLWMDLDSVHLGPVRVHSILSSTHRQASRVALTFDFPFYGHQVRQIT 139

  Fly   274 VATGGFLYTGEYVHSWLAATQYIAPLMANFDTSMSNDSFVRLHDNGTAFTAVWENVTLQDKPDFG 338
            :|||||::||:..|..|.|||||||||||||.|.|..|.||..|||..|...|:.|.|:|:...|
Zfish   140 IATGGFIFTGDITHRMLTATQYIAPLMANFDPSYSKYSTVRYLDNGDTFVVQWDKVRLKDRETEG 204

  Fly   339 KFTFSVTLYQSGDIVFAYMLVPTNINSIQDKEHPVKVGLSDAYII---DKQLFFARRKTIYEYHR 400
            .|||...|.::|.|||.|..||..:..|...|||||||||||:|.   ..|...|::||||||||
Zfish   205 AFTFQTVLCRNGTIVFNYKDVPLPVEKINSTEHPVKVGLSDAFIALLSSPQSSDAKQKTIYEYHR 269

  Fly   401 VTFQQHEITNNTIIKLAAQPTCLGYNDCNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGC 465
            |.....:|.||:..:....||||.:..|..|:..|.|..|.||:.|.|||.|.||.:.||:...|
Zfish   270 VEIDTTKIVNNSAFEFTPLPTCLQHTTCKQCLQSNITSGCGWCNTLQRCSDGIDRYRQEWMDHNC 334

  Fly   466 EATAIHTSSLCPALGDKGNNAAGQGK-NGSANSGASANGATNTSTSSSGSSTPVTEPSVMST--- 526
            ...|                   :|| :..|:.|..::.:.....|.|.:.:||..|:...|   
Zfish   335 FEEA-------------------KGKCDDYAHGGPESSNSPFRLPSPSIAPSPVARPASPMTEGE 380

  Fly   527 -RAPHATAYIKPGVDHSSDIHADGKVGNAELSKAEADNKNVGVAFGFMVPICLVFAVTLWLFYAY 590
             ..|..||.|                              .||....   |.|||...|.::|..
Zfish   381 EEVPEHTAII------------------------------AGVVAAL---ILLVFLTLLAVYYIN 412

  Fly   591 RNPHTKSGQLLIQFRPSQWSW 611
            .:|.......|:|.|.:.: |
Zfish   413 THPTVAPPFYLMQRRGNNY-W 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0289NP_001303555.1 PSI 421..477 CDD:279745 21/55 (38%)
plxdc1XP_005156181.1 PSI 291..334 CDD:214655 18/42 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574678
Domainoid 1 1.000 207 1.000 Domainoid score I2828
eggNOG 1 0.900 - - E1_KOG3848
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 276 1.000 Inparanoid score I2919
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1361987at2759
OrthoFinder 1 1.000 - - FOG0003589
OrthoInspector 1 1.000 - - otm26556
orthoMCL 1 0.900 - - OOG6_105338
Panther 1 1.100 - - O PTHR13055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5819
SonicParanoid 1 1.000 - - X2460
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

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