DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(1)G0289 and plxdc1

DIOPT Version :10

Sequence 1:NP_001401057.1 Gene:l(1)G0289 / 31964 FlyBaseID:FBgn0028331 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001139778.2 Gene:plxdc1 / 100286775 ZFINID:ZDB-GENE-081104-391 Length:465 Species:Danio rerio


Alignment Length:477 Identity:160/477 - (33%)
Similarity:218/477 - (45%) Gaps:86/477 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 KKPTLLGQSGNPKKVASSVVAATMTDPSPAVID--VDVSKVVDVPEEEIEAAVKNASLKESVDFH 216
            :|..:.|||......:|...........|.:::  :.:..:.|...:.:|            |..
Zfish    24 QKDFISGQSARTDGGSSDTQRTRRDRTGPQLLNNGLSIGTLPDNTTQVVE------------DSQ 76

  Fly   217 EYYNSVLY---ENKDEVASLWTELKAT---PENI--MLSSSHRRAMTVELKFDFPFYGHFVRNIT 273
            .||:...:   ||:.:  :||.:|.:.   |..:  :|||:||:|..|.|.||||||||.||.||
Zfish    77 RYYSWCSFGPGENRTK--NLWMDLDSVHLGPVRVHSILSSTHRQASRVALTFDFPFYGHQVRQIT 139

  Fly   274 VATGGFLYTGEYVHSWLAATQYIAPLMANFDTSMSNDSFVRLHDNGTAFTAVWENVTLQDKPDFG 338
            :|||||::||:..|..|.|||||||||||||.|.|..|.||..|||..|...|:.|.|:|:...|
Zfish   140 IATGGFIFTGDITHRMLTATQYIAPLMANFDPSYSKYSTVRYLDNGDTFVVQWDKVRLKDRETEG 204

  Fly   339 KFTFSVTLYQSGDIVFAYMLVPTNINSIQDKEHPVKVGLSDAYII---DKQLFFARRKTIYEYHR 400
            .|||...|.::|.|||.|..||..:..|...|||||||||||:|.   ..|...|::||||||||
Zfish   205 AFTFQTVLCRNGTIVFNYKDVPLPVEKINSTEHPVKVGLSDAFIALLSSPQSSDAKQKTIYEYHR 269

  Fly   401 VTFQQHEITNNTIIKLAAQPTCLGYNDCNSCINHNTTFTCLWCSVLNRCSTGTDRKKHEWLQMGC 465
            |.....:|.||:..:....||||.:..|..|:..|.|..|.||:.|.|||.|.||.:.||:...|
Zfish   270 VEIDTTKIVNNSAFEFTPLPTCLQHTTCKQCLQSNITSGCGWCNTLQRCSDGIDRYRQEWMDHNC 334

  Fly   466 EATAIHTSSLCPALGDKGNNAAGQGK-NGSANSGASANGATNTSTSSSGSSTPVTEPSVMST--- 526
            ...|                   :|| :..|:.|..::.:.....|.|.:.:||..|:...|   
Zfish   335 FEEA-------------------KGKCDDYAHGGPESSNSPFRLPSPSIAPSPVARPASPMTEGE 380

  Fly   527 -RAPHATAYIKPGVDHSSDIHADGKVGNAELSKAEADNKNVGVAFGFMVPICLVFAVTLWLFYAY 590
             ..|..||.|                              .||....   |.|||...|.::|..
Zfish   381 EEVPEHTAII------------------------------AGVVAAL---ILLVFLTLLAVYYIN 412

  Fly   591 RNPHTKSGQLLIQSK--QFRPS 610
            .:|.......|:|.:  .:.||
Zfish   413 THPTVAPPFYLMQRRGNNYWPS 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(1)G0289NP_001401057.1 PSI 421..477 CDD:396154 21/55 (38%)
plxdc1NP_001139778.2 None

Return to query results.
Submit another query.