DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ia and AT1G27520

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_564288.1 Gene:AT1G27520 / 839643 AraportID:AT1G27520 Length:574 Species:Arabidopsis thaliana


Alignment Length:515 Identity:162/515 - (31%)
Similarity:248/515 - (48%) Gaps:81/515 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 ITMGIADHNPGGIQFER---RAHVKQMMEHAWHNYKLYAWGKNELRPLSQR-PHSASIFGSYDL- 260
            :|..:.|.:...|:.::   |..|::|..||:.||..||:..:||:||::. ..|.|..|:..| 
plant    18 LTFFVVDPSSQHIEVKKKQMREKVREMFYHAYDNYMTYAFPHDELKPLTKSFTDSLSELGNLKLE 82

  Fly   261 ---------GATIVDGLDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTL 316
                     ..|:|:.|.:|.|:|...|:.:|..|:....:.| |.|.:::||.|||.:||:::.
plant    83 HLPTDYNGSAVTLVESLSSLAILGNSTEFEKGVLWLSENLTFD-IDARVNLFECNIRVLGGLISA 146

  Fly   317 YAFTGDP-------LYKEK----AQHVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSSI 370
            :....||       .|..:    |:.:..:.||||:||||:|||.:|.|.||.:|....:..|..
plant   147 HLLAIDPNNRLIQGSYNNQLLRLAEDLGKRFLPAFETPTGLPYAWINLKNGVMENETTETSTSGC 211

  Fly   371 LSEFGTLHLEFAYLSDITGNPLYRE-RVQTIRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGA 434
                |:|.||...||.:||:|.:.. .::.:|| |..:.....|....|:..||:|.:...|:||
plant   212 ----GSLVLEMGALSRLTGDPRFESAALRALRQ-LWRMRSSLDLLGTTLDVVTGEWIEYSSSIGA 271

  Fly   435 LGDSYYEYLLKAWLQSGQTDEEAREMFDEAMLAILDKMVRTSP---------GGLTYVSDLKFDR 490
            ..||:|||||||::..|:  |:...||..|.|| ..|..|..|         |..||        
plant   272 GVDSFYEYLLKAYILFGK--EDYWRMFHSAYLA-SQKYFRHGPWYHEANMWSGKPTY-------- 325

  Fly   491 LEHKMDHLACFSGGLFALGAATRQNDYTDKYMEVGK-GITNTCHESYIRAPTQLG--PEAFRFSE 552
              .::..|..|..||..|               ||. ...|:.|..:.....:.|  ||.:    
plant   326 --WQLTSLQAFWPGLQVL---------------VGDIAAANSSHREFFHVWEKFGVLPERY---- 369

  Fly   553 AVEARALRSQEKYYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQ 617
            .::.:.:....|||.||||..||.|.|::.|.|..|.|.|...|.:|..:.:...|:..:|:|..
plant   370 LLDHQIIHPTMKYYPLRPELAESTFYLYQATKDPWYLDVGESMVKSLNLYTKVPGGFASVRDVTT 434

  Fly   618 QEPQKDDVQQSFFLAETLKYLYLLFSDDSVLPLDEWVFNTEAHPLPIKGANAYYRQAPVT 677
            .  |.:|.|.|||||||.||||||| |||.:....::|.||.||:.:  .::::.:.|.|
plant   435 M--QLEDHQHSFFLAETCKYLYLLF-DDSFVAKRNYIFTTEGHPIQV--VSSWHEKLPET 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 157/485 (32%)
AT1G27520NP_564288.1 Glyco_hydro_47 44..476 CDD:460241 154/472 (33%)

Return to query results.
Submit another query.