DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alpha-Man-Ia and man1b1a

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_005161175.1 Gene:man1b1a / 562592 ZFINID:ZDB-GENE-091116-34 Length:682 Species:Danio rerio


Alignment Length:629 Identity:222/629 - (35%)
Similarity:337/629 - (53%) Gaps:60/629 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 YSTLQQHHLSRSDLNYIQAATHPKNLQRQLQQQQQQQLQQQQPN---KIVIEIGLSN---DSGPS 130
            ||:|.:.....||          ::|:....:...:.|:...|.   |:...:|:.:   |..|.
Zfish    73 YSSLTEQWRGISD----------RSLKEDWDEVDNRGLRPIPPGLIPKLSAGVGVQDVQPDVMPE 127

  Fly   131 ---------SAPASSTLGSSSTGPRILQ-----AAEALMEGNVDSISLPAAAPLTAATTSSAKS- 180
                     ..|.:.....|..||..||     :...|.:|....|.........|.|..|.:. 
Zfish   128 LQKPSIPLLPKPPAMRKPPSKRGPPALQKRMNVSDWQLKDGEEGLIKTDEDGAKEAKTVISWRGA 192

  Fly   181 -LENSQGSDTPHSHANTTNADITM----GIADHNPGGIQ-FERRAHVKQMMEHAWHNYKLYAWGK 239
             :|..||::.   .:.....|.|:    ..||...|.:: .:|...|::...|||..||.:|||.
Zfish   193 MIEAEQGTEL---QSTIQGKDATVVDAEEAADLKTGTLKPVDRVEAVQEAFRHAWKGYKAFAWGH 254

  Fly   240 NELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYREGRDWIERKFSLDNISAELSVFE 304
            :||:||| :.| ...||   ||.|::|.|||::|:||:.|:.|.|.|:|.:.|... :.::::||
Zfish   255 DELKPLS-KTH-GEWFG---LGLTLIDALDTMWILGLKDEFAEARKWVETELSFSK-NVDVNLFE 313

  Fly   305 TNIRFVGGMLTLYAFTGDPLYKEKAQHVADKLLPAFQTPTGIPYALVNTKTGVAKNYGWASGGSS 369
            :.||.:||:|:.|..:||.|:.:||:.:..:|:|||:||:.|||:.||...|.|....|.:  .|
Zfish   314 STIRILGGLLSTYHLSGDTLFLDKAKDIGFRLMPAFKTPSKIPYSDVNIGKGTAHPPRWTT--DS 376

  Fly   370 ILSEFGTLHLEFAYLSDITGNPLYRERVQTIRQVLKEIE-KPKGLYPNFLNPKTGKWGQL-HMSL 432
            .::|..::.|||..||.:|.:|.|:..|:.:.:.:..:| |..||.|.|:|..:||:.:. ..:|
Zfish   377 TVAEVTSIQLEFRELSRLTQDPQYQNAVEEVTKQVHRLEGKRDGLVPMFINTNSGKFTRRGAFTL 441

  Fly   433 GALGDSYYEYLLKAWLQSGQTDEEAREMFDEAMLAILDKMVR-TSPGGLTYVSDLKFDRLEHKMD 496
            ||..|||||||||.|||.|:.:.|..|.:.:|:..:...::: ||...||:|.:|...||..|||
Zfish   442 GARADSYYEYLLKQWLQGGKKETELLEDYIQAIEGVKKNLLKQTSTSKLTFVGELSNGRLNPKMD 506

  Fly   497 HLACFSGGLFALGAATRQNDYTDKYMEVGKGITNTCHESYIRAPTQLGPEAFRFS-EAVEARAL- 559
            ||.||..|..||||   .|.....:||:...:..|||:.|::..|.|.||...|: :....|.: 
Zfish   507 HLVCFLPGTLALGA---HNGLPADHMELAIQLIETCHQMYVQMETGLSPEIAHFNLQNHNGRDID 568

  Fly   560 -RSQEKYYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRT-AHGYCGLRNVYQQ-EPQ 621
             :..:::.:|||||.||.|.::|.|.|.||||||||.:.:..||.|. :.||..:.||... .|.
Zfish   569 VKPADRHNLLRPETVESLFYMYRFTKDSKYRDWGWEILQSFNKHTRVPSGGYTSIGNVRDPLNPA 633

  Fly   622 KDDVQQSFFLAETLKYLYLLFSDDS-VLPLDEWVFNTEAHPLPI 664
            ..|..:||||:||||||:||||||: ::.||::|||||||||||
Zfish   634 PRDKMESFFLSETLKYLFLLFSDDTELISLDKYVFNTEAHPLPI 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 186/448 (42%)
man1b1aXP_005161175.1 Glyco_hydro_47 239..677 CDD:279825 186/448 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54359
OrthoDB 1 1.010 - - D263455at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100239
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R728
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.860

Return to query results.
Submit another query.