DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and edem3

DIOPT Version :10

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:XP_005166989.2 Gene:edem3 / 559811 ZFINID:ZDB-GENE-070801-5 Length:888 Species:Danio rerio


Alignment Length:511 Identity:156/511 - (30%)
Similarity:233/511 - (45%) Gaps:95/511 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RAHVKQMMEHAWHNYKLYAWGKNELRPLSQR-------PHSASI---FGSYDLGATIVDGLDTLY 272
            |..|.:|.:||:.||..:|:..:||.||:.|       |....:   .|.:.|  |::|.||||.
Zfish    38 RIQVLEMFDHAYRNYMDHAYPADELMPLTCRGRVRGLEPSRGDVDDALGKFSL--TLIDTLDTLA 100

  Fly   273 IMGLEKEYREGRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAFTGDPLYKEKAQ------- 330
            ::....|:.|....:.:...||| ...:||||||||.:||:|..::..  .:.||..|       
Zfish   101 LLNKTVEFEEAVRRVVKDVRLDN-DIVVSVFETNIRVLGGLLGGHSMA--VMLKENGQMVWYQNE 162

  Fly   331 --HVAD----KLLPAFQTPTGIPYALVN---------TKTGVAKNYGWASGGSSILSEFGTLHLE 380
              |:|.    :|||||.|.:|:||..||         |:||.......|..        ||:.||
Zfish   163 LLHMAKDLGLRLLPAFNTSSGLPYPRVNLRHGVHGPETRTGTETETCTACA--------GTIILE 219

  Fly   381 FAYLSDITGNPLYRERVQTIRQVL-KEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLL 444
            ||.||..||:|.:....:.....| ::.::...|....:|..:|:|.:....:||..|||||||:
Zfish   220 FAALSRFTGDPTFEAHARRALDFLWEKRQRNSNLVGTTINIHSGEWVRRDSGVGAGIDSYYEYLM 284

  Fly   445 KAWLQSGQTDEEAREMFDEAMLAILDKMVRTSPGGLTYVSDLKFDRLEHK--------MDHLACF 501
            ||::..|  |::....|:....:|: |.:...|        |..|...||        ||.|..|
Zfish   285 KAYILLG--DDQLLLRFNTHYASIM-KYISQPP--------LLLDVHIHKPLLPARTWMDSLLAF 338

  Fly   502 SGGLFALGAATRQNDYTDKYMEVGKGITNTCHESYIRAPTQLG--PEAFRFSEAVEARALRSQEK 564
            ..||..|....|....|              ||...:...:..  ||||    ..:.|...:|  
Zfish   339 FPGLQVLKGDIRPAIET--------------HEMLYQVTKKHNFLPEAF----TTDFRVHWAQ-- 383

  Fly   565 YYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQSF 629
             :.||||..||.:.|::.|.|..|.:.|...:..|.:..|...|:..:::|  :....:|...||
Zfish   384 -HPLRPEFAESTYFLYKATRDPYYLEVGRTVLENLNRFARVPCGFAAMKDV--RTGSHEDRMDSF 445

  Fly   630 FLAETLKYLYLLFSDDSVLP--LDEWVFNTEAHPLPIKGANAYYRQAPVTLPVSNA 683
            ||||..|||:|||:::..||  ::::||.||||.||:..:.|....||   ||.|:
Zfish   446 FLAEMFKYLFLLFAEEEDLPFNVEDYVFTTEAHLLPLSLSTASNSPAP---PVINS 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 LanC_like 216..664 CDD:471159 149/490 (30%)
edem3XP_005166989.2 Glyco_hydro_47 44..482 CDD:460241 147/484 (30%)
PA_EDEM3_like 644..770 CDD:239041
Blue background indicates that the domain is not in the aligned region.

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