DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha-Man-Ia and edem2

DIOPT Version :9

Sequence 1:NP_727408.2 Gene:alpha-Man-Ia / 31957 FlyBaseID:FBgn0259170 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001005031.1 Gene:edem2 / 448548 XenbaseID:XB-GENE-941890 Length:555 Species:Xenopus tropicalis


Alignment Length:509 Identity:162/509 - (31%)
Similarity:228/509 - (44%) Gaps:128/509 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 RAHVKQMMEHAWHNYKLYAWGKNELRPLSQRPHSASIFGSYDLGATIVDGLDTLYIMGLEKEYRE 282
            |..||.|..||::||..:|:..:|||||:  ......:||:.|  |::|.||||.|:|...|::.
 Frog    36 RDRVKSMFYHAYNNYLDHAFPYDELRPLT--CDGQDTWGSFSL--TLIDALDTLLIIGNVTEFQR 96

  Fly   283 GRDWIERKFSLDNISAELSVFETNIRFVGGMLTLYAF--------------TGDPLYKEKAQHVA 333
            ..:.::.....| |....||||||||.|||:|:.:.|              || ||.: .|:..|
 Frog    97 VVNVLQDTLDFD-IDVNASVFETNIRVVGGLLSAHLFSKRAGLELEPGWPCTG-PLLR-MAEEAA 158

  Fly   334 DKLLPAFQTPTGIPYALVN-------TKTGVAKNYGWASGGSSILSEFGTLHLEFAYLSDITGNP 391
            .||||||.|.||:||..||       |:|.|....|           .||..:|||.||.:||:|
 Frog   159 RKLLPAFDTATGMPYGTVNLLRGVNPTETPVTCTAG-----------VGTFIVEFATLSRLTGDP 212

  Fly   392 LYRERVQTIRQVLKEIEKPKGLYPNFLNPKTGKWGQLHMSLGALGDSYYEYLLKA--WLQSGQTD 454
            .:....:...:.|.|.....||..|.::..|.||......:||..|||:|||:|.  .||    |
 Frog   213 QFEMVARRALRGLWESRSDIGLVGNHVDVMTSKWVAQDAGIGAGVDSYFEYLVKGAILLQ----D 273

  Fly   455 EEAREMFDEAMLAILD--------KMVRTSPGGLTYVSDLKFDRLEHKMDHLACFSGGLFAL--- 508
            ||...||.|...|:.:        ..|:...|.:|..   .|..||       .|..||.:|   
 Frog   274 EELMSMFLEYNKALQNFTKYDDWYVWVQMYKGTVTMP---VFQSLE-------AFWPGLQSLVGD 328

  Fly   509 ---GAATRQNDYT--------DKYMEVGKGITNTCHESYIRAPTQLGPEAFRFSEAVEARALRSQ 562
               |..:..|.||        .::..:.:|.|                        ||.|     
 Frog   329 IRSGMRSFLNYYTVWRQFGGLPEFYSIPQGFT------------------------VEKR----- 364

  Fly   563 EKYYILRPETFESYFVLWRLTHDQKYRDWGWEAVLALEKHCRTAHGYCGLRNVYQQEPQKDDVQQ 627
             :.|.||||..||...|::.|.|....:.|.:||.::|:..:...|:..:::|  ::.:.|:..:
 Frog   365 -EGYPLRPELIESAMYLYKATRDPILLELGRDAVESIERISKVDCGFATIKDV--RDHKLDNRME 426

  Fly   628 SFFLAETLKYLYLLFSDDS------------VLPLDE-------WVFNTEAHPL 662
            |||||||:|||||||..|:            |.|..|       :||||||||:
 Frog   427 SFFLAETIKYLYLLFDPDNFIHNDGSTSDLVVTPYGECVMGAGGYVFNTEAHPI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha-Man-IaNP_727408.2 Glyco_hydro_47 224..664 CDD:279825 159/503 (32%)
edem2NP_001005031.1 Glyco_hydro_47 42..480 CDD:366693 158/501 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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